SEED Subsystem: DNA Repair Base Excision in Escherichia coli BL21

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) ECD_02311
DNA polymerase I (EC 2.7.7.7) ECD_02643
  ECD_03749
DNA polymerase II (EC 2.7.7.7) ECD_00062
DNA-3-methyladenine glycosylase (EC 3.2.2.20) ECD_03399
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) ECD_01974
Endonuclease III (EC 4.2.99.18) ECD_01603
Endonuclease VIII ECD_00674
Exodeoxyribonuclease I (EC 3.1.11.1) ECD_01914
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) ECD_03492
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) ECD_02724
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 ECD_02474

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Or view this subsystem at the SEED (slow)