SEED Subsystem: Serine-glyoxylate cycle in Azospirillum sp. SherDot2

Experiments:

Role Gene Name  
3-ketoacyl-CoA thiolase (EC 2.3.1.16) No genes
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) MPMX19_00635
5-FCL-like protein, but predicted not to be 5-formyltetrahydrofolate cyclo-ligase (5-FCL) No genes
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) MPMX19_00693
Acetoacetyl-CoA reductase (EC 1.1.1.36) MPMX19_01911
Acetyl-CoA acetyltransferase (EC 2.3.1.9) MPMX19_01912
  MPMX19_03465
Aconitate hydratase (EC 4.2.1.3) No genes
Citrate synthase (EC 2.3.3.1) No genes
Citrate synthase (si) (EC 2.3.3.1) MPMX19_01007
  MPMX19_06086
  MPMX19_06958
  MPMX19_06962
Enolase (EC 4.2.1.11) MPMX19_02845
  MPMX19_03972
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) MPMX19_03166
Fumarate hydratase class I, anaerobic (EC 4.2.1.2) No genes
GDSL-like lipase/acylhydrolase No genes
Glycerate kinase (EC 2.7.1.31) No genes
Isocitrate lyase (EC 4.1.3.1) MPMX19_04657
  MPMX19_05830
Malate dehydrogenase (EC 1.1.1.37) MPMX19_00107
  MPMX19_03677
  MPMX19_05201
  MPMX19_06463
Malate synthase-related protein No genes
Malyl-CoA lyase (EC 4.1.3.24) No genes
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) MPMX19_02743
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) MPMX19_03940
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) MPMX19_03938
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9) MPMX19_02918
  MPMX19_04739
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) MPMX19_02743
Methylmalonyl-CoA mutase (EC 5.4.99.2) MPMX19_05021
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) MPMX19_02917
  MPMX19_04737
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) No genes
Phosphoglyceromutase No genes
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) No genes
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) MPMX19_05019
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) MPMX19_00727
  MPMX19_03072
  MPMX19_04704
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes
Serine--pyruvate aminotransferase (EC 2.6.1.51) No genes
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) MPMX19_02409
  MPMX19_06505
  MPMX19_06530
  MPMX19_06882
  MPMX19_06896
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) MPMX19_02408
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) MPMX19_00105
  MPMX19_04434
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) MPMX19_00106
  MPMX19_04435
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) No genes
crotonyl-CoA reductase No genes
cytosolic long-chain acyl-CoA thioester hydrolase family protein MPMX19_00971
decarboxylase No genes
isobutyryl-CoA dehydrogenase No genes
low-specificity D-threonine aldolase MPMX19_04017
polyhydroxyalkanoate synthesis repressor PhaR No genes
putative glycerate kinase No genes
putative isobutyryl-CoA mutase, chain B No genes

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Or view this subsystem at the SEED (slow)