SEED Subsystem: Nitrogen fixation in Azospirillum sp. SherDot2

Experiments:

Role Gene Name  
4Fe-4S ferredoxin, nitrogenase-associated MPMX19_00579
  MPMX19_01843
AnfO protein, required for Mo- and V-independent nitrogenase No genes
AnfR protein, required for Mo- and V-independent nitrogenase No genes
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily MPMX19_00470
Homocitrate synthase (EC 2.3.3.14) MPMX19_00469
Homocitrate synthase alpha subunit (EC 2.3.3.14) No genes
Homocitrate synthase omega subunit (EC 2.3.3.14) No genes
Iron-sulfur cluster assembly scaffold protein NifU MPMX19_00471
LRV (FeS)4 cluster domain protein clustered with nitrogenase cofactor synthesis MPMX19_01845
NifB-domain protein, type 2 No genes
NifM protein No genes
NifT protein MPMX19_01849
NifX-associated protein MPMX19_00581
NifY protein No genes
NifZ protein MPMX19_01846
  MPMX19_01847
Nitrogenase (iron-iron) alpha chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) beta chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) delta chain (EC 1.18.6.1) No genes
Nitrogenase (iron-iron) reductase and maturation protein AnfH No genes
Nitrogenase (iron-iron) transcriptional regulator No genes
Nitrogenase (molybdenum-iron) alpha chain (EC 1.18.6.1) MPMX19_00587
Nitrogenase (molybdenum-iron) beta chain (EC 1.18.6.1) MPMX19_00586
Nitrogenase (molybdenum-iron) reductase and maturation protein NifH MPMX19_00588
Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA MPMX19_01840
Nitrogenase (vanadium-iron) alpha chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) beta chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) delta chain (EC 1.18.6.1) No genes
Nitrogenase (vanadium-iron) reductase and maturation protein VnfH No genes
Nitrogenase (vanadium-iron) transcriptional regulator VnfA No genes
Nitrogenase FeMo-cofactor carrier protein NifX MPMX19_00582
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE MPMX19_00584
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN MPMX19_00583
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB MPMX19_01842
Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ MPMX19_00790
Nitrogenase cofactor carrier protein NafY No genes
Nitrogenase stabilizing/protective protein NifW MPMX19_00467
Nitrogenase vanadium-cofactor synthesis protein VnfE No genes
Nitrogenase vanadium-cofactor synthesis protein VnfN No genes
Nitrogenase vanadium-cofactor synthesis protein VnfX No genes
Nitrogenase vanadium-cofactor synthesis protein VnfY No genes
Nitrogenase-associated protein NifO MPMX19_00593
  MPMX19_00970
Transcriptional repressor of nif and glnA operons No genes
probable iron binding protein from the HesB_IscA_SufA family in Nif operon No genes

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