SEED Subsystem: Arginine and Ornithine Degradation in Azospirillum sp. SherDot2

Experiments:

Role Gene Name  
Agmatinase (EC 3.5.3.11) MPMX19_03399
  MPMX19_03696
  MPMX19_06753
Agmatine deiminase (EC 3.5.3.12) MPMX19_04878
Arginase (EC 3.5.3.1) MPMX19_03634
Arginine ABC transporter, ATP-binding protein ArtP No genes
Arginine ABC transporter, periplasmic arginine-binding protein ArtI No genes
Arginine ABC transporter, periplasmic arginine-binding protein ArtJ No genes
Arginine ABC transporter, permease protein ArtM No genes
Arginine ABC transporter, permease protein ArtQ MPMX19_02468
Arginine N-succinyltransferase (EC 2.3.1.109) No genes
Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) No genes
Arginine N-succinyltransferase, beta subunit (EC 2.3.1.109) No genes
Arginine decarboxylase (EC 4.1.1.19) MPMX19_01174
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine deiminase (EC 3.5.3.6) No genes
Arginine pathway regulatory protein ArgR, repressor of arg regulon No genes
Arginine permease RocE No genes
Arginine utilization protein RocB No genes
Arginine utilization regulatory protein RocR No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine ABC transporter, ATP-binding protein AotP MPMX19_02466
  MPMX19_03636
Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein No genes
Arginine/ornithine ABC transporter, permease protein AotM No genes
Arginine/ornithine ABC transporter, permease protein AotQ No genes
Arginine/ornithine antiporter ArcD MPMX19_02498
Biosynthetic arginine decarboxylase (EC 4.1.1.19) No genes
Carbamate kinase (EC 2.7.2.2) No genes
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) MPMX19_05932
Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) MPMX19_03707
  MPMX19_05397
Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) No genes
Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) MPMX19_02469
  MPMX19_03639
Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) No genes
Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) MPMX19_02467
  MPMX19_02976
  MPMX19_03483
  MPMX19_03637
N-carbamoylputrescine amidase (3.5.1.53) MPMX19_01284
NADP-specific glutamate dehydrogenase (EC 1.4.1.4) No genes
Ornithine aminotransferase (EC 2.6.1.13) No genes
Ornithine carbamoyltransferase (EC 2.1.3.3) MPMX19_02178
Ornithine cyclodeaminase (EC 4.3.1.12) MPMX19_02385
  MPMX19_03633
  MPMX19_05210
  MPMX19_06828
Ornithine decarboxylase (EC 4.1.1.17) MPMX19_01174
  MPMX19_05197
Putrescine aminotransferase (EC 2.6.1.82) No genes
Succinylarginine dihydrolase (EC 3.5.3.23) No genes
Succinylglutamate desuccinylase (EC 3.5.1.96) No genes
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) No genes
Succinylornithine transaminase (EC 2.6.1.81) No genes
Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family No genes
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes

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