SEED Subsystem: DNA Repair Base Excision in Alteromonas macleodii MIT1002

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC MIT1002_03768
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) MIT1002_01924
DNA polymerase I (EC 2.7.7.7) MIT1002_00014
DNA polymerase II (EC 2.7.7.7) MIT1002_03358
DNA-3-methyladenine glycosylase (EC 3.2.2.20) MIT1002_00008
  MIT1002_03632
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) MIT1002_02355
Endonuclease III (EC 4.2.99.18) MIT1002_01251
Endonuclease VIII MIT1002_02957
Exodeoxyribonuclease I (EC 3.1.11.1) MIT1002_01676
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) MIT1002_00057
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) MIT1002_00788
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 MIT1002_03083

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Or view this subsystem at the SEED (slow)