SEED Subsystem: TCA Cycle in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Atu2636
Aconitate hydratase (EC 4.2.1.3) Atu2685
Aconitate hydratase 2 (EC 4.2.1.3) Atu4734
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) Atu1392
  Atu4851
  Atu5306
  Atu5307
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) Atu2632
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Atu2635
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) No genes
Fumarate hydratase class II (EC 4.2.1.2) Atu1616
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) Atu1870
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) No genes
Malate dehydrogenase (EC 1.1.1.37) Atu2639
Malate:quinone oxidoreductase (EC 1.1.5.4) Atu0811
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Atu2643
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Atu2642
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Atu2637
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Atu2638
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase Atu2684

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