SEED Subsystem: Ribosome biogenesis bacterial in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
16S rRNA processing protein RimM Atu2700
Dimethyladenosine transferase (EC 2.1.1.-) No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
LSU m3Psi1915 methyltransferase RlmH Atu2776
LSU m5C1962 methyltransferase RlmI No genes
RNA pseudouridylate synthase, group 1 No genes
Ribonuclease E (EC 3.1.26.12) No genes
Ribonuclease M5 (EC 3.1.26.8) No genes
Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) Atu4041
Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) Atu1471
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) Atu2443
Ribosomal protein L11 methyltransferase (EC 2.1.1.-) Atu2072
Ribosomal protein S6 glutaminyl transferase No genes
Ribosomal-protein-L7p-serine acetyltransferase No genes
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Atu0353
Ribosomal-protein-S5p-alanine acetyltransferase Atu0785
Similar to ribosomal large subunit pseudouridine synthase A No genes
Similar to ribosomal large subunit pseudouridine synthase A, group 2 No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type No genes
Similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type No genes
Similar to ribosomal large subunit pseudouridine synthase D, TTE1780-type No genes
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase No genes
tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) Atu2701

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