SEED Subsystem: Pyrimidine utilization in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) Atu2385
  Atu3070
Dihydropyrimidinase (EC 3.5.2.2) Atu2386
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) No genes
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway Atu2497
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway Atu2499
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway Atu2495
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway Atu2500
Predicted reductase RutE in novel pyrimidine catabolism pathway Atu2496
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein Atu2388
Pyrimidine ABC transporter, substrate-binding component Atu2391
Pyrimidine ABC transporter, transmembrane component 1 Atu2389
Pyrimidine ABC transporter, transmembrane component 2 Atu2390
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) Atu2384
Uracil permease Atu3076

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Or view this subsystem at the SEED (slow)