SEED Subsystem: Polyhydroxybutyrate metabolism in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Atu0503
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) Atu3597
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Atu0503
3-ketoacyl-CoA thiolase (EC 2.3.1.16) Atu4823
Acetoacetyl-CoA reductase (EC 1.1.1.36) Atu2770
Acetoacetyl-CoA synthetase (EC 6.2.1.16) Atu4130
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Atu0990
  Atu2308
  Atu4131
  Atu4839
D-beta-hydroxybutyrate permease No genes
Enoyl-CoA hydratase (EC 4.2.1.17) Atu0733
  Atu1417
Intracellular PHB depolymerase (EC 3.1.1.-) Atu0015
Poly(3-hydroxyalkanoate) depolymerase No genes
Polyhydroxyalkanoate granule-associated protein PhaF No genes
Polyhydroxyalkanoic acid synthase Atu1604
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter No genes
polyhydroxyalkanoate granule-associated protein PhaI No genes
polyhydroxyalkanoate synthesis repressor PhaR No genes

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