SEED Subsystem: Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) No genes
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) AsnB No genes
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) AsnH No genes
Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) YisO No genes
Aspartate aminotransferase (EC 2.6.1.1) Atu0235
  Atu0529
  Atu1589
  Atu1848
  Atu2196
  Atu4266
  Atu4278
Aspartate ammonia-lyase (EC 4.3.1.1) Atu3793
Aspartate racemase (EC 5.1.1.13) Atu3073
  Atu4081
Aspartate--ammonia ligase (EC 6.3.1.1) No genes
Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) No genes
Glutamate racemase (EC 5.1.1.3) Atu1867
Glutamate synthase [NADPH] large chain (EC 1.4.1.13) Atu0145
  Atu0930
  Atu1154
  Atu3640
  Atu3784
  Atu4229
  Atu4443
Glutamate synthase [NADPH] putative GlxC chain (EC 1.4.1.13) Atu4228
Glutamate synthase [NADPH] small chain (EC 1.4.1.13) Atu3783
Glutaminase (EC 3.5.1.2) Atu1859
Glutamine amidotransferase protein GlxB (EC 2.4.2.-) Atu4227
Glutamine synthetase (EC 6.3.1.2) No genes
Glutamine synthetase family protein in hypothetical Actinobacterial gene cluster No genes
Glutamine synthetase type I (EC 6.3.1.2) Atu1770
  Atu4230
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) Atu2416
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
L-asparaginase (EC 3.5.1.1) Atu3791
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system Atu2184
  Atu3413
NAD-specific glutamate dehydrogenase (EC 1.4.1.2) No genes
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), eukaryotic type No genes
NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form Atu2766
NADP-specific glutamate dehydrogenase (EC 1.4.1.4) No genes
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
glutamine synthetase family protein Atu0193
  Atu0602
  Atu2142

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