SEED Subsystem: DNA-replication in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) Atu1780
ATP-dependent DNA helicase RecQ Atu0061
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA Atu0324
  Atu0917
  Atu1143
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Atu3724
DNA polymerase I (EC 2.7.7.7) Atu0110
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) Atu1292
DNA polymerase III beta subunit (EC 2.7.7.7) Atu0301
DNA polymerase III chi subunit (EC 2.7.7.7) Atu1111
DNA polymerase III delta prime subunit (EC 2.7.7.7) Atu1497
DNA polymerase III delta subunit (EC 2.7.7.7) Atu2750
DNA polymerase III epsilon subunit (EC 2.7.7.7) Atu0005
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) Atu0096
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) Atu2168
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN Atu2083
  Atu5023
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication Atu2627
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA Atu3723
Holliday junction DNA helicase RuvB Atu3722
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein Atu1874
Recombination protein RecR Atu0093
Replicative DNA helicase (EC 3.6.1.-) Atu1084
  Atu4427
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) Atu1586
Transcription-repair coupling factor Atu1778

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