SEED Subsystem: D-ribose utilization in Agrobacterium fabrum C58

Experiments:

Role Gene Name  
Predicted nucleoside ABC transporter, ATP-binding component Atu0127
Predicted nucleoside ABC transporter, permease 1 component Atu0128
Predicted nucleoside ABC transporter, permease 2 component Atu0129
Predicted nucleoside ABC transporter, substrate-binding component Atu0126
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) Atu0364
  Atu2509
  Atu3068
  Atu4649
  Atu4847
Ribose 5-phosphate isomerase A (EC 5.3.1.6) Atu1613
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Atu1898
  Atu3536
  Atu3818
  Atu3880
  Atu4032
  Atu4321
  Atu4370
  Atu4745
  Atu4843
  Atu6069
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) No genes
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Atu1899
  Atu3372
  Atu4320
  Atu4842
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Atu1397
  Atu1402
  Atu1900
  Atu2090
  Atu2818
  Atu3065
  Atu3238
  Atu3370
  Atu3534
  Atu3535
  Atu3819
  Atu3879
  Atu3968
  Atu3969
  Atu4030
  Atu4031
  Atu4244
  Atu4322
  Atu4359
  Atu4371
  Atu4372
  Atu4679
  Atu4746
  Atu4844
  Atu4845
  Atu5481
  Atu6068
Ribose operon repressor Atu3162
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 Atu4747
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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