SEED Subsystem: D-ribose utilization in Dickeya dianthicola ME23

Experiments:

Role Gene Name PDB  
⨯
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) DZA65_RS22295 -0.8
Ribose 5-phosphate isomerase A (EC 5.3.1.6) DZA65_RS19545 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) DZA65_RS02270 -0.1
  DZA65_RS09635 -0.0
  DZA65_RS22310 +0.1
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) DZA65_RS22315 +0.0
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) DZA65_RS22300 -0.3
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) DZA65_RS02275 +0.0
  DZA65_RS09630 +0.1
  DZA65_RS18855 -0.1
  DZA65_RS22305 -0.0
Ribose operon repressor DZA65_RS16225 -1.1
  DZA65_RS22290 -1.2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)