SEED Subsystem: D-gluconate and ketogluconates metabolism in Dickeya dianthicola ME23

Experiments:

Role Gene Name PDB  
2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) DZA65_RS01765 +0.2
2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274) No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, cytochrome c No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, gamma subunit No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) DZA65_RS21825 +0.0
2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) DZA65_RS00195 +0.1
5-keto-D-gluconate 5-reductase (EC 1.1.1.69) DZA65_RS11720 +0.0
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA No genes
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldB No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit No genes
Gluconate operon transcriptional repressor No genes
Gluconate permease No genes
Gluconate permease, Bsu4004 homolog No genes
Gluconate transporter family protein No genes
Gluconate utilization system Gnt-I transcriptional repressor DZA65_RS20970 -2.1
Gluconokinase (EC 2.7.1.12) DZA65_RS20965 +0.3
Glucose 1-dehydrogenase (EC 1.1.1.47) No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, cytochrome c No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, flavoprotein No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, gamma subunit No genes
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) No genes
High-affinity gluconate transporter GntT DZA65_RS20960 +0.0
Hypothetical oxidoreductase YqhD (EC 1.1.-.-) DZA65_RS01770 +0.0
Hypothetical transcriptional regulator YqhC DZA65_RS01775 +0.1
L-idonate 5-dehydrogenase (EC 1.1.1.264) No genes
L-idonate, D-gluconate, 5-keto-D-gluconate transporter No genes
Low-affinity gluconate/H+ symporter GntU No genes
Positive regulator of L-idonate catabolism No genes
Predicted gluconate TRAP family transporter, DctM subunit No genes
Predicted gluconate TRAP family transporter, DctP subunit No genes
Predicted gluconate TRAP family transporter, DctQ subunit No genes

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