SEED Subsystem: Oxidative stress in Escherichia coli BL21

Experiments:

Role Gene Name Ox4  
⨯
Alkyl hydroperoxide reductase subunit C-like protein No genes
Catalase (EC 1.11.1.6) ECD_01701 N.D.
  ECD_03828 -0.1
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR ECD_00640 N.D.
Ferroxidase (EC 1.16.3.1) ECD_00779 -0.2
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator ECD_03846 -1.5
Iron-binding ferritin-like antioxidant protein ECD_00779 -0.2
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) ECD_03794 +0.0
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR ECD_04045 -0.3
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps ECD_00779 -0.2
Organic hydroperoxide resistance protein No genes
Organic hydroperoxide resistance transcriptional regulator No genes
Paraquat-inducible protein A ECD_00954 +0.9
  ECD_01804 +0.7
Paraquat-inducible protein B ECD_00955 +0.7
  ECD_00956 +1.9
  ECD_01805 +0.8
Peroxidase (EC 1.11.1.7) ECD_03828 -0.1
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR ECD_03935 -0.1
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS ECD_03934 -0.4
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) ECD_01616 N.D.
Superoxide dismutase [Fe] (EC 1.15.1.1) ECD_01626 N.D.
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR ECD_03918 +1.3
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family No genes
transcriptional regulator, Fur family No genes

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