| Role | Gene | Name | Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x | |
| | | ⨯ | |
| Assimilatory nitrate reductase large subunit (EC:1.7.99.4) | PS417_14735 | | -0.9 | |
| Cytochrome c nitrite reductase, small subunit NrfH | No genes | | | |
| Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly | No genes | | | |
| Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly | No genes | | | |
| Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly | No genes | | | |
| Cytochrome c-type protein NapC | No genes | | | |
| Cytochrome c-type protein NrfB precursor | No genes | | | |
| Cytochrome c552 precursor (EC 1.7.2.2) | No genes | | | |
| Ferredoxin--nitrite reductase (EC 1.7.7.1) | No genes | | | |
| Ferredoxin-type protein NapF (periplasmic nitrate reductase) | No genes | | | |
| Ferredoxin-type protein NapG (periplasmic nitrate reductase) | No genes | | | |
| Nitrate ABC transporter, ATP-binding protein | No genes | | | |
| Nitrate ABC transporter, nitrate-binding protein | PS417_14410 | | +0.0 | |
| | PS417_20960 | | -0.5 | |
| Nitrate ABC transporter, permease protein | No genes | | | |
| Nitrate reductase cytochrome c550-type subunit | No genes | | | |
| Nitrate/nitrite response regulator protein | PS417_15740 | | -0.1 | |
| Nitrate/nitrite sensor protein (EC 2.7.3.-) | PS417_15735 | | -0.2 | |
| Nitrate/nitrite transporter | PS417_07265 | | +0.0 | |
| | PS417_10835 | | -0.1 | |
| | PS417_11005 | | +0.2 | |
| | PS417_12995 | | +0.0 | |
| | PS417_15725 | | -0.1 | |
| | PS417_15730 | | +0.1 | |
| | PS417_20970 | | -0.7 | |
| Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | PS417_14730 | | -1.5 | |
| Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) | PS417_14725 | | -1.6 | |
| Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) | No genes | | | |
| Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) | No genes | | | |
| Nitrite transporter NirC | No genes | | | |
| Nitrite transporter from formate/nitrite family | No genes | | | |
| NrfC protein | No genes | | | |
| NrfD protein | No genes | | | |
| Periplasmic nitrate reductase component NapD | No genes | | | |
| Periplasmic nitrate reductase component NapE | No genes | | | |
| Periplasmic nitrate reductase component NapL | No genes | | | |
| Periplasmic nitrate reductase precursor (EC 1.7.99.4) | No genes | | | |
| Polyferredoxin NapH (periplasmic nitrate reductase) | No genes | | | |
| Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly | No genes | | | |
| Respiratory nitrate reductase alpha chain (EC 1.7.99.4) | PS417_15720 | | -0.0 | |
| Respiratory nitrate reductase beta chain (EC 1.7.99.4) | PS417_15715 | | +0.0 | |
| Respiratory nitrate reductase delta chain (EC 1.7.99.4) | PS417_15710 | | -0.6 | |
| Respiratory nitrate reductase gamma chain (EC 1.7.99.4) | PS417_15705 | | -0.3 | |
| Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) | No genes | | | |
| Response regulator NasT | PS417_20965 | | -1.3 | |