SEED Subsystem: cAMP signaling in bacteria in Pseudomonas sp. RS175

Experiments:

Role Gene Name methyl-trans-p-coumarate (C)  
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) PFR28_05096 N.D.
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) PFR28_01228 N.D.
  PFR28_02682 +0.4
Adenine phosphoribosyltransferase (EC 2.4.2.7) PFR28_01078 -0.7
Adenylate cyclase (EC 4.6.1.1) PFR28_00991 +0.2
  PFR28_04310 -0.5
  PFR28_04371 -0.1
Adenylate/guanylate cyclase (EC 4.6.1.2) No genes
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily No genes
Cyclic AMP receptor protein PFR28_04041 +0.1
ElaA protein PFR28_04176 -0.2
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) No genes
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase PFR28_03127 -0.2
  PFR28_04263 +0.2
Predicted signal-transduction protein containing cAMP-binding and CBS domains PFR28_04112 +1.1
Prophage Clp protease-like protein No genes
Purine cyclase-related protein No genes
Putative Heme-regulated two-component response regulator No genes
Putative hemin-binding lipoprotein No genes
Putative insecticidal toxin complex PFR28_03072 +0.0
  PFR28_03460 -0.0
  PFR28_03567 +0.0
adenylate cyclase ExoY No genes
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423) No genes
bifunctional hemolysin-adenylate cyclase precursor No genes
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases No genes
cAMP-dependent Kef-type K+ transport system No genes
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074) No genes
cyclolysin secretion ATP-binding protein No genes
cyclolysin secretion protein No genes
cyclolysin-activating lysine-acyltransferase No genes
trans-acting positive regulator (Atx A) No genes
transcriptional activator AtxA, (pXO1-119) No genes

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