SEED Subsystem: Rhamnose containing glycans in Pseudomonas sp. RS175

Experiments:

Role Gene Name methyl-trans-p-coumarate (C)  
⨯
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) No genes
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) No genes
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) No genes
Capsular polysaccharide ABC transporter, permease protein KpsM No genes
Capsular polysaccharide biosynthesis/export periplasmic protein WcbA No genes
Capsular polysaccharide export system protein KpsC No genes
DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase No genes
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) PFR28_04059 +2.0
  PFR28_04893 N.D.
Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) No genes
Heteropolysaccharide repeat unit export protein No genes
Polysialic acid transport protein KpsM No genes
Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) PFR28_04557 -0.0
UDP-glucose 4-epimerase (EC 5.1.3.2) PFR28_00816 +0.4
  PFR28_02436 +0.3
  PFR28_03960 N.D.
  PFR28_04553 +0.4
capsular polysaccharide biosynthesis protein No genes
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) PFR28_00814 +0.1
  PFR28_04892 N.D.
dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) PFR28_03961 +2.3
  PFR28_04891 N.D.
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) PFR28_02769 -0.6
  PFR28_04894 N.D.
putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide No genes
putative polysialic acid transport protein No genes

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