| Role | Gene | Name | 4-Guanidinobutyric (C) | |
|---|
| | | ⨯ | |
| Agmatinase (EC 3.5.3.11) | PFR28_00778 | | -4.8 | |
| Agmatine deiminase (EC 3.5.3.12) | PFR28_04897 | | -0.1 | |
| Arginase (EC 3.5.3.1) | No genes | | | |
| Arginine ABC transporter, ATP-binding protein ArtP | No genes | | | |
| Arginine ABC transporter, periplasmic arginine-binding protein ArtI | No genes | | | |
| Arginine ABC transporter, periplasmic arginine-binding protein ArtJ | PFR28_01452 | | -0.1 | |
| Arginine ABC transporter, permease protein ArtM | No genes | | | |
| Arginine ABC transporter, permease protein ArtQ | PFR28_04913 | | +0.1 | |
| Arginine N-succinyltransferase (EC 2.3.1.109) | PFR28_01267 | | -0.3 | |
| | PFR28_03281 | | +0.1 | |
| Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) | PFR28_01268 | | -0.4 | |
| | PFR28_03282 | | +0.2 | |
| Arginine N-succinyltransferase, beta subunit (EC 2.3.1.109) | No genes | | | |
| Arginine decarboxylase (EC 4.1.1.19) | PFR28_00113 | | -0.0 | |
| Arginine decarboxylase, catabolic (EC 4.1.1.19) | No genes | | | |
| Arginine deiminase (EC 3.5.3.6) | PFR28_00551 | | N.D. | |
| | PFR28_02178 | | N.D. | |
| Arginine pathway regulatory protein ArgR, repressor of arg regulon | PFR28_03284 | | +0.1 | |
| Arginine permease RocE | No genes | | | |
| Arginine utilization protein RocB | No genes | | | |
| Arginine utilization regulatory protein RocR | No genes | | | |
| Arginine/agmatine antiporter | No genes | | | |
| Arginine/ornithine ABC transporter, ATP-binding protein AotP | PFR28_03285 | | +0.1 | |
| Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein | PFR28_01280 | | -0.1 | |
| | PFR28_03288 | | +0.0 | |
| | PFR28_03548 | | +0.0 | |
| Arginine/ornithine ABC transporter, permease protein AotM | PFR28_03286 | | +0.1 | |
| Arginine/ornithine ABC transporter, permease protein AotQ | PFR28_03287 | | +0.2 | |
| Arginine/ornithine antiporter ArcD | PFR28_00552 | | N.D. | |
| | PFR28_00553 | | -0.1 | |
| | PFR28_01974 | | -0.2 | |
| | PFR28_02177 | | N.D. | |
| Biosynthetic arginine decarboxylase (EC 4.1.1.19) | PFR28_05228 | | -0.1 | |
| Carbamate kinase (EC 2.7.2.2) | PFR28_00549 | | N.D. | |
| | PFR28_02180 | | N.D. | |
| Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) | PFR28_05053 | | -0.1 | |
| Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) | PFR28_00503 | | -0.1 | |
| | PFR28_04915 | | +0.1 | |
| Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) | No genes | | | |
| Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) | PFR28_00505 | | +0.1 | |
| Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) | PFR28_00506 | | -0.1 | |
| Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) | PFR28_00507 | | -0.0 | |
| | PFR28_04514 | | +0.2 | |
| | PFR28_04914 | | +0.4 | |
| N-carbamoylputrescine amidase (3.5.1.53) | PFR28_04896 | | +0.1 | |
| NADP-specific glutamate dehydrogenase (EC 1.4.1.4) | No genes | | | |
| Ornithine aminotransferase (EC 2.6.1.13) | No genes | | | |
| Ornithine carbamoyltransferase (EC 2.1.3.3) | PFR28_00550 | | +0.3 | |
| | PFR28_02179 | | +0.2 | |
| | PFR28_03363 | | -4.7 | |
| Ornithine cyclodeaminase (EC 4.3.1.12) | PFR28_03545 | | -0.1 | |
| Ornithine decarboxylase (EC 4.1.1.17) | PFR28_00113 | | -0.0 | |
| Putrescine aminotransferase (EC 2.6.1.82) | PFR28_03397 | | -0.1 | |
| Succinylarginine dihydrolase (EC 3.5.3.23) | PFR28_03279 | | +0.1 | |
| Succinylglutamate desuccinylase (EC 3.5.1.96) | PFR28_03277 | | +0.3 | |
| Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) | PFR28_03280 | | -0.0 | |
| Succinylornithine transaminase (EC 2.6.1.81) | PFR28_03283 | | +0.3 | |
| Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family | No genes | | | |
| Transcriptional regulator of catabolic arginine decarboxylase (adiA) | No genes | | | |