SEED Subsystem: Heat shock dnaK gene cluster extended in Agrobacterium fabrum C58

Role	Gene	Name	R2A with Vancomycin 0.009 mM
Chaperone protein DnaJ	Atu0121		N.D.
Chaperone protein DnaK	Atu0122		N.D.
DNA replication intiation control protein YabA	No genes
FIG001341: Probable Fe(2+)-trafficking protein YggX	No genes
FIG009886: phosphoesterase	No genes
Glutathione synthetase (EC 6.3.2.3)	Atu0310		N.D.
	Atu4147		-0.1
Heat shock protein GrpE	Atu0329		N.D.
Heat-inducible transcription repressor HrcA	Atu0328		-1.4
HspR, transcriptional repressor of DnaK operon	No genes
Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent	No genes
MiaB family protein, possibly involved in tRNA or rRNA modification	No genes
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)	Atu0326		N.D.
Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster	No genes
RNA polymerase sigma factor RpoH	Atu2445		N.D.
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB	Atu0325		N.D.
Ribonuclease PH (EC 2.7.7.56)	Atu0327		N.D.
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)	Atu0657		+0.7
Ribosomal protein L11 methyltransferase (EC 2.1.1.-)	Atu2072		-0.2
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)	Atu2752		+0.0
Signal peptidase-like protein	No genes
Translation elongation factor LepA	Atu0241		N.D.
Xanthosine/inosine triphosphate pyrophosphatase	No genes
rRNA small subunit methyltransferase I	Atu0302		-2.6
tmRNA-binding protein SmpB	Atu1025		N.D.