SEED Subsystem: Ubiquinone Biosynthesis in Escherichia coli BW25113

Role	Gene	Name	Ying_AminoAcid20 rep B; time point 3
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-)	b0662	ubiF	N.D.
	b2906	visC	-0.9
2-octaprenyl-6-methoxyphenol hydroxylase (EC 1.14.13.-)	b2907	ubiH	N.D.
3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64)	b4306	yjhP	-0.1
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)	b3843	ubiD	N.D.
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-)	b2311	ubiX	N.D.
4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-)	No genes
Chorismate--pyruvate lyase (EC 4.1.3.40)	b4039	ubiC	-1.1
NAD(P)H-flavin reductase (EC 1.5.1.29) (EC 1.16.1.3)	b3844	fre	-2.3
Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes	b3834	yigP	-0.2
Ubiquinone biosynthesis enzyme COQ7	No genes
Ubiquinone biosynthesis monooxygenase UbiB	b3835	ubiB	N.D.
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-)	No genes