SEED Subsystem: Alanine biosynthesis in Escherichia coli BW25113

Experiments:

Role Gene Name Ying_OrganicAcid7 rep C; time point 1  
⨯
Alanine racemase (EC 5.1.1.1) b1190 dadX +1.1
Alanine racemase, biosynthetic (EC 5.1.1.1) No genes
Alanine racemase, catabolic (EC 5.1.1.1) No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) b3770 ilvE -2.7
Cysteine desulfurase (EC 2.8.1.7) No genes
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily b2530 iscS N.D.
Cysteine desulfurase (EC 2.8.1.7), NifS subfamily No genes
Cysteine desulfurase (EC 2.8.1.7), SufS subfamily No genes
Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA b2810 csdA +0.1
Glutamate-pyruvate aminotransferase (EC 2.6.1.2) No genes
HTH-type transcriptional regulator IlvY b3773 ilvY -2.2
Valine--pyruvate aminotransferase (EC 2.6.1.66) b3572 avtA -1.2
Valine--pyruvate aminotransferase (EC 2.6.1.66) b3572 avtA -1.2

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