SEED Subsystem: NAD and NADP cofactor biosynthesis global in Escherichia coli BW25113

Experiments:

Role Gene Name vcDART vector transformation; liquid outgrowth assay  
3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) No genes
ADP-ribose pyrophosphatase (EC 3.6.1.13) b3034 nudF +0.3
Amidases related to nicotinamidase No genes
C-terminal domain of CinA type S No genes
C-terminal domain of CinA type S homolog No genes
Glutamine amidotransferase chain of NAD synthetase No genes
Indoleamine 2,3-dioxygenase (EC 1.13.11.52) No genes
Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis No genes
Kynureninase (EC 3.7.1.3) No genes
Kynurenine 3-monooxygenase (EC 1.14.13.9) No genes
Kynurenine formamidase (EC 3.5.1.9) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) No genes
Kynurenine formamidase, yeast-type BNA7 (EC 3.5.1.9) No genes
L-Aspartate dehydrogenase (EC 1.4.1.21) No genes
L-aspartate oxidase (EC 1.4.3.16) b2574 nadB +0.4
N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1) No genes
NAD kinase (EC 2.7.1.23) b2615 yfjB N.D.
NAD pyrophosphatase, periplasmic (EC 3.6.1.22) No genes
NAD synthetase (EC 6.3.1.5) b1740 nadE N.D.
NAD transporter of endosymbionts, possible No genes
NMN 5'-nucleotidase, extracellular (EC 3.1.3.5) No genes
NMN phosphatase (EC 3.1.3.5) No genes
NMN synthetase (EC 6.3.1.-) No genes
NadR transcriptional regulator b4390 nadR -0.7
Niacin transporter NiaP No genes
Niacin transporter in yeast, DAL5 family No genes
Nicotinamidase (EC 3.5.1.19) b1768 ydjB +0.3
Nicotinamidase family protein YcaC b0897 ycaC -0.6
Nicotinamidase/isochorismatase family protein b1867 yecD +0.2
Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) No genes
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) No genes
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family No genes
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) No genes
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) b4390 nadR -0.7
Nicotinate phosphoribosyltransferase (EC 2.4.2.11) b0931 pncB +1.6
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) b0639 nadD N.D.
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family No genes
Nicotinate-nucleotide adenylyltransferase, NadM family (EC 2.7.7.18) No genes
Nicotine adenine dinucleotide glycohydrolase (NADGH) (EC 3.2.2.5) No genes
Nudix-related transcriptional regulator NrtR No genes
Predicted N-ribosylNicotinamide CRP-like regulator b2163 yeiL +0.0
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) b0109 nadC -0.4
Quinolinate synthetase (EC 2.5.1.72) b0750 nadA -0.0
Ribosyl nicotinamide transporter, PnuC-like b0751 pnuC -0.4
Ribosylnicotinamide kinase (EC 2.7.1.22) b4390 nadR -0.7
Ribosylnicotinamide kinase, eukaryotic (EC 2.7.1.22) No genes
Substrate-specific component NiaX of predicted niacin ECF transporter No genes
Transcriptional repressor for NAD biosynthesis in gram-positives No genes
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) No genes

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