SEED Subsystem: D-ribose utilization in Pseudomonas putida KT2440

Experiments:

Role Gene Name Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days  
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Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) PP_2458 +0.5
Ribose 5-phosphate isomerase A (EC 5.3.1.6) PP_5150 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) PP_2455 +1.2
  PP_2759 +0.2
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) PP_2459 +0.4
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) PP_2454 +0.8
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) PP_2456 +0.8
Ribose operon repressor PP_2457 +1.9
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)