SEED Subsystem: Glycine and Serine Utilization in Escherichia coli ECRC101

Experiments:

Role Gene Name Bas06  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) MCAODC_06220 kbl -0.4
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) MCAODC_10040 gcvT +0.3
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) MCAODC_09980 serA +0.0
  MCAODC_23240 ghrA -0.1
D-serine dehydratase (EC 4.3.1.18) MCAODC_12980 dsdA +0.3
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX MCAODC_12985 dsdX +0.3
D-serine/D-alanine/glycine transporter MCAODC_02585 cycA -0.1
Glycerate kinase (EC 2.7.1.31) MCAODC_27105 glxK -0.3
Glycine cleavage system H protein MCAODC_10045 gcvH +0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) MCAODC_10050 gcvP -0.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) MCAODC_18860 sdaA -0.3
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) MCAODC_24880 serC -0.2
Phosphoserine phosphatase (EC 3.1.3.3) MCAODC_01715 serB +0.2
Serine hydroxymethyltransferase (EC 2.1.2.1) MCAODC_12040 glyA N.D.
Serine transporter MCAODC_06640 yhjV -0.0
  MCAODC_08945 dlsT -0.0
  MCAODC_10435 yqeG +0.1
  MCAODC_10705 sdaC +1.6
Seryl-tRNA synthetase (EC 6.1.1.11) MCAODC_24945 serS N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) MCAODC_08915 tdcB +0.2

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