SEED Subsystem: Flagellum in Pseudomonas simiae WCS417

Experiments:

Role Gene Name Phosphomycin 0.003 mg/ml  
⨯
Flagellar L-ring protein FlgH PS417_19880 +0.5
Flagellar M-ring protein FliF PS417_19805 -0.1
Flagellar P-ring protein FlgI PS417_19875 N.D.
Flagellar assembly protein FliH PS417_19795 +0.4
Flagellar basal-body P-ring formation protein FlgA PS417_21585 +1.1
Flagellar basal-body rod modification protein FlgD PS417_21560 +0.6
Flagellar basal-body rod protein FlgB PS417_21570 +0.7
Flagellar basal-body rod protein FlgC PS417_21565 +0.9
Flagellar basal-body rod protein FlgF PS417_19890 N.D.
Flagellar basal-body rod protein FlgG PS417_10860 +0.2
  PS417_19885 +0.6
Flagellar biosynthesis protein FlgN PS417_21595 +0.5
Flagellar biosynthesis protein FlhA PS417_19710 +0.5
  PS417_03460 +0.3
Flagellar biosynthesis protein FlhB PS417_19725 +0.5
Flagellar biosynthesis protein FlhF PS417_19705 +0.4
Flagellar biosynthesis protein FliC No genes
Flagellar biosynthesis protein FliL PS417_19760 +0.5
  PS417_27335 +1.4
Flagellar biosynthesis protein FliO No genes
Flagellar biosynthesis protein FliP PS417_19740 +0.4
Flagellar biosynthesis protein FliQ PS417_19735 +0.1
  PS417_19745 +0.2
Flagellar biosynthesis protein FliR PS417_19730 +0.9
Flagellar biosynthesis protein FliS PS417_19835 +0.8
Flagellar biosynthesis protein FliT No genes
Flagellar biosynthesis protein FliZ No genes
Flagellar hook protein FlgE PS417_21555 +0.8
Flagellar hook-associated protein 3 No genes
Flagellar hook-associated protein FlgK PS417_19865 +0.8
Flagellar hook-associated protein FlgL PS417_19860 +0.8
Flagellar hook-associated protein FliD PS417_19840 +0.8
Flagellar hook-basal body complex protein FliE PS417_19810 N.D.
Flagellar hook-length control protein FliK PS417_19765 +0.2
Flagellar motor rotation protein MotA PS417_19670 N.D.
  PS417_02435 +0.7
Flagellar motor rotation protein MotB PS417_19665 +0.1
  PS417_02440 +0.4
Flagellar motor switch protein FliG PS417_19800 -1.1
Flagellar motor switch protein FliM PS417_19755 +0.2
Flagellar motor switch protein FliN PS417_19750 N.D.
Flagellar protein FlbB No genes
Flagellar protein FlbD No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) PS417_19870 +0.7
Flagellar protein FlhE No genes
Flagellar protein FliJ PS417_19785 +0.4
Flagellar regulatory protein FleQ PS417_19815 N.D.
  PS417_19825 +0.8
Flagellar sensor histidine kinase FleS PS417_19820 +0.2
Flagellar synthesis regulator FleN PS417_19700 N.D.
Flagellar trans-acting factor FliX No genes
Flagellar transcriptional activator FlhC No genes
Flagellar transcriptional activator FlhD No genes
Flagellin protein FlaA No genes
Flagellin protein FlaB PS417_19850 +0.7
Flagellin protein FlaC No genes
Flagellin protein FlaD No genes
Flagellin protein FlaE No genes
Flagellin protein FlaF No genes
Flagellin protein FlaG PS417_19845 N.D.
Flagellum-specific ATP synthase FliI PS417_19790 +0.5
  PS417_03470 +0.1
Negative regulator of flagellin synthesis No genes
Negative regulator of flagellin synthesis FlgM PS417_21590 N.D.
RNA polymerase sigma factor RpoD PS417_25880 N.D.
RNA polymerase sigma factor for flagellar operon PS417_19695 +0.6
RNA polymerase sigma-54 factor RpoN PS417_17070 +0.8
  PS417_03450 +0.0
  PS417_04345 N.D.

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