SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Pseudomonas simiae WCS417

Experiments:

Role Gene Name Cisplatin 0.01 mg/ml  
⨯
ATP-dependent Clp protease ATP-binding subunit ClpA PS417_16510 +0.3
ATP-dependent Clp protease ATP-binding subunit ClpX PS417_17230 N.D.
ATP-dependent Clp protease adaptor protein ClpS PS417_16515 -0.2
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) PS417_17235 N.D.
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU PS417_01915 +0.8
ATP-dependent protease HslV (EC 3.4.25.-) PS417_01920 -0.2
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I PS417_05240 -1.2
  PS417_17225 N.D.
ATP-dependent protease La (EC 3.4.21.53) Type II PS417_24230 +0.1
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family PS417_04125 N.D.
ClpB protein PS417_11665 N.D.
  PS417_15300 +0.0
  PS417_27980 +0.0
  PS417_03830 +0.4
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease No genes
Outer membrane stress sensor protease DegS PS417_03705 -0.7

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