SEED Subsystem: Photorespiration (oxidative C2 cycle) in Agrobacterium fabrum C58

Experiments:

Role Gene Name R2A with Vancomycin 0.009 mM  
⨯
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) Atu2737 +0.1
  Atu3159 +0.4
  Atu5173 -1.1
2-oxoglutarate/malate translocator No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Atu1464 -0.1
Catalase (EC 1.11.1.6) Atu4642 N.D.
  Atu5491 +0.3
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) Atu2053 +0.3
D-glycerate 3-kinase (EC 2.7.1.31), plant type No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein Atu1463 -0.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Atu1462 -0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE Atu0666 +0.3
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF Atu0667 +0.3
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD Atu0665 +0.4
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) No genes
Hydroxypyruvate reductase (EC 1.1.1.81) Atu0077 +0.4
  Atu5333 N.D.
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) No genes
Malate synthase G (EC 2.3.3.9) Atu0047 +0.4
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) Atu1614 -3.0
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) Atu1165 N.D.
  Atu4314 -0.0
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes

Or select organism:

Or view this subsystem at the SEED (slow)