SEED Subsystem: One-carbon metabolism by tetrahydropterines in Agrobacterium fabrum C58

Experiments:

Role Gene Name R2A with m-arsenite 0.8 mM  
⨯
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Atu1418 +0.1
  Atu1764 +1.4
  Atu2123 -0.8
5-FCL-like protein, but predicted not to be 5-formyltetrahydrofolate cyclo-ligase (5-FCL) No genes
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) Atu3731 +0.2
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC 1.5.99.9) No genes
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) No genes
Formyltetrahydrofolate deformylase (EC 3.5.1.10) Atu2464 -0.7
  Atu4231 +0.4
  Atu4315 +0.0
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) Atu0589 N.D.
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9) No genes
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) Atu0589 N.D.
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) No genes

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