SEED Subsystem: Bacterial RNA-metabolizing Zn-dependent hydrolases in Agrobacterium fabrum C58

Experiments:

Role Gene Name R2A with m-arsenite 0.8 mM  
⨯
Cell division protein FtsK Atu2759 N.D.
  Atu3210 +0.2
Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) Atu4092 +0.2
Ferric uptake regulation protein FUR Atu0354 -3.0
Hydrolase (HAD superfamily) in cluster with DUF1447 No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
Metallo-beta-lactamase family protein, RNA-specific Atu1285 -3.1
Peptide deformylase (EC 3.5.1.88) Atu0366 N.D.
  Atu1550 -0.5
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) Atu0082 N.D.
Protein of unknown function DUF1447 No genes
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) Atu0353 -0.1
Transcriptional regulator in cluster with Zn-dependent hydrolase No genes
Trk system potassium uptake protein TrkA Atu1449 +1.1
YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA No genes
Zn-dependent hydrolase, RNA-metabolising No genes
Zn-dependent hydrolase, RNA-metabolising, CPSF 100 kDa analog No genes
Zn-dependent hydrolase, RNA-metabolising, CPSF 73 kDa analog No genes
cytochrome d ubiquinol oxidase, subunit II-related protein No genes

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