SEED Subsystem: Bacterial Chemotaxis in Pseudomonas putida KT2440

Experiments:

Role Gene Name P. put PUT 10 MOI 1  
⨯
Aerotaxis sensor receptor protein No genes
Chemotaxis protein CheC -- inhibitor of MCP methylation No genes
Chemotaxis protein CheD No genes
Chemotaxis protein CheV (EC 2.7.3.-) PP_0802 +0.2
  PP_2128 -0.2
  PP_4393 -0.5
Chemotaxis protein CheX No genes
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) PP_1490 +0.0
  PP_3760 -0.1
  PP_4392 -0.6
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY PP_0768 +0.1
  PP_3758 +0.2
  PP_4340 -0.6
Chemotaxis response - phosphatase CheZ PP_4339 -0.2
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) PP_1493 -0.9
  PP_4337 -0.2
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) PP_0882 +0.1
  PP_0884 -0.0
  PP_0885 -0.3
  PP_4458 -0.2
  PP_5283 -2.8
Flagellar motor switch protein FliG PP_4368 -0.4
Flagellar motor switch protein FliM PP_4358 -0.3
Flagellar motor switch protein FliN PP_4357 N.D.
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) No genes
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE No genes
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) PP_0317 -0.1
  PP_0562 +0.1
  PP_1488 -0.1
  PP_1819 +0.0
  PP_2120 -0.2
  PP_4658 +0.1
  PP_5020 -0.2
  PP_5021 +0.1
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) No genes
Positive regulator of CheA protein activity (CheW) PP_4332 -0.0
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) PP_4338 -0.4
  PP_4988 +0.6

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