SEED Subsystem: Peptidoglycan Biosynthesis in Pseudomonas putida KT2440

Experiments:

Role Gene Name P. putida PUT10 MOI 10  
⨯
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) PP_1331 N.D.
  PP_3741 -0.0
D-alanine--D-alanine ligase (EC 6.3.2.4) PP_1339 N.D.
  PP_4346 -0.1
  PP_5673 -0.5
D-alanine--D-alanine ligase A (EC 6.3.2.4) No genes
D-alanine--D-alanine ligase B (EC 6.3.2.4) No genes
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) PP_2098 -1.4
  PP_4803 +1.0
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) PP_5411 N.D.
Glutamate racemase (EC 5.1.1.3) PP_0736 N.D.
Glutamine synthetase type I (EC 6.3.1.2) PP_5046 N.D.
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-) No genes
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) PP_4798 -1.5
  PP_4805 -1.3
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) PP_5107 +0.1
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) PP_4683 -0.0
  PP_5084 -0.7
Murein-DD-endopeptidase (EC 3.4.99.-) PP_3794 -0.1
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) PP_5411 N.D.
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23) No genes
Penicillin-binding protein 2 (PBP-2) PP_4807 N.D.
Penicillin-binding protein 4 precursor No genes
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase No genes
Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C PP_0572 -0.0
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) PP_1334 N.D.
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
Rare lipoprotein A precursor PP_4804 +0.4
Rod shape-determining protein RodA PP_4806 N.D.
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) PP_1904 N.D.
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) PP_0964 N.D.
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) PP_1337 N.D.
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) PP_1338 N.D.
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) PP_1335 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) PP_1332 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) PP_1333 N.D.

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