SEED Subsystem: Lipid A modifications in Pseudomonas putida KT2440

Experiments:

Role Gene Name P. putida South MOI 1  
⨯
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO PP_2423 -0.1
  PP_4570 -1.4
Lipid A 3-O-deacylase PP_0737 +0.3
  PP_3154 -0.0
Lipid A acylation protein PagP, palmitoyltransferase No genes
Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A No genes
Phosphoethanolamine transferase specific for the outer Kdo residue of lipopolysaccharide No genes
Sensor protein PhoQ (EC 2.7.13.3) PP_1187 +0.2
  PP_2348 -0.5
Sensor protein basS/pmrB (EC 2.7.3.-) No genes
Transcriptional regulatory protein PhoP PP_1186 -1.7
Transcriptional regulatory protein basR/pmrA No genes
UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide PP_2579 -0.1

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Or view this subsystem at the SEED (slow)