SEED Subsystem: D-ribose utilization in Escherichia coli ECOR38

Experiments:

Role Gene Name Bas09  
⨯
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) HEPCGN_12060 rbsK -0.3
  HEPCGN_13440 rbsK +1.7
Ribose 5-phosphate isomerase A (EC 5.3.1.6) HEPCGN_18755 rpiA N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) HEPCGN_07530 ccmA +0.0
  HEPCGN_13455 rbsA +0.3
  HEPCGN_16545 xylG -0.1
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) HEPCGN_13460 rbsD +0.6
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) HEPCGN_13445 rbsB -0.1
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) HEPCGN_07525 araH -0.1
  HEPCGN_13450 rbsC +0.2
  HEPCGN_16550 -0.0
Ribose operon repressor HEPCGN_13435 rbsR +2.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein HEPCGN_07535 rbsB -0.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)