SEED Subsystem: Pyrimidine utilization in Agrobacterium fabrum C58

Experiments:

Role Gene Name Orotic (N)  
⨯
Beta-ureidopropionase (EC 3.5.1.6) Atu2385 -0.5
  Atu3070 -0.2
Dihydropyrimidinase (EC 3.5.2.2) Atu2386 -0.3
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) No genes
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway Atu2497 -2.1
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway Atu2499 -2.4
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway Atu2495 -1.7
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway Atu2500 -2.4
Predicted reductase RutE in novel pyrimidine catabolism pathway Atu2496 -2.2
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein Atu2388 -0.5
Pyrimidine ABC transporter, substrate-binding component Atu2391 -0.7
Pyrimidine ABC transporter, transmembrane component 1 Atu2389 -0.5
Pyrimidine ABC transporter, transmembrane component 2 Atu2390 -0.6
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) Atu2384 +0.4
Uracil permease Atu3076 -0.1

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Or view this subsystem at the SEED (slow)