SEED Subsystem: Flagellum in Pseudomonas putida KT2440

Experiments:

Role Gene Name 3-methyl-1-butanol 0.4 vol%  
⨯
Flagellar L-ring protein FlgH PP_4384 +2.6
Flagellar M-ring protein FliF PP_4369 +2.7
Flagellar P-ring protein FlgI PP_4383 +2.7
Flagellar assembly protein FliH PP_4367 +2.5
Flagellar basal-body P-ring formation protein FlgA PP_4394 +2.6
Flagellar basal-body rod modification protein FlgD PP_4389 +2.3
Flagellar basal-body rod protein FlgB PP_4391 +2.5
Flagellar basal-body rod protein FlgC PP_4390 +2.7
Flagellar basal-body rod protein FlgF PP_4386 +2.5
Flagellar basal-body rod protein FlgG PP_4385 +2.6
Flagellar biosynthesis protein FlgN PP_4396 +0.6
Flagellar biosynthesis protein FlhA PP_4344 +2.4
Flagellar biosynthesis protein FlhB PP_4352 +2.6
Flagellar biosynthesis protein FlhF PP_4343 +1.8
Flagellar biosynthesis protein FliC No genes
Flagellar biosynthesis protein FliL PP_4359 +1.8
  PP_5209 -0.2
Flagellar biosynthesis protein FliO No genes
Flagellar biosynthesis protein FliP PP_4355 +2.3
Flagellar biosynthesis protein FliQ PP_4354 +2.7
  PP_4356 +2.5
Flagellar biosynthesis protein FliR PP_4353 +2.4
Flagellar biosynthesis protein FliS PP_4375 +0.3
Flagellar biosynthesis protein FliT No genes
Flagellar biosynthesis protein FliZ No genes
Flagellar hook protein FlgE PP_4388 +2.6
Flagellar hook-associated protein 3 No genes
Flagellar hook-associated protein FlgK PP_4381 +1.0
Flagellar hook-associated protein FlgL PP_4380 +0.0
Flagellar hook-associated protein FliD PP_4376 -0.0
Flagellar hook-basal body complex protein FliE PP_4370 +2.6
Flagellar hook-length control protein FliK PP_4361 +2.6
Flagellar motor rotation protein MotA PP_4336 -0.8
  PP_4905 -0.8
Flagellar motor rotation protein MotB PP_4335 -0.4
  PP_4904 -0.2
Flagellar motor switch protein FliG PP_4368 +2.8
Flagellar motor switch protein FliM PP_4358 +2.5
Flagellar motor switch protein FliN PP_4357 N.D.
Flagellar protein FlbB No genes
Flagellar protein FlbD No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) PP_4382 +2.4
Flagellar protein FlhE No genes
Flagellar protein FliJ PP_4365 +2.6
Flagellar regulatory protein FleQ PP_4371 +1.2
  PP_4373 +1.9
Flagellar sensor histidine kinase FleS PP_4372 +0.7
Flagellar synthesis regulator FleN PP_4342 -0.3
Flagellar trans-acting factor FliX No genes
Flagellar transcriptional activator FlhC No genes
Flagellar transcriptional activator FlhD No genes
Flagellin protein FlaA No genes
Flagellin protein FlaB PP_4378 -1.0
Flagellin protein FlaC No genes
Flagellin protein FlaD No genes
Flagellin protein FlaE No genes
Flagellin protein FlaF No genes
Flagellin protein FlaG PP_4377 -0.2
Flagellum-specific ATP synthase FliI PP_4366 +2.6
Negative regulator of flagellin synthesis No genes
Negative regulator of flagellin synthesis FlgM PP_4395 N.D.
RNA polymerase sigma factor RpoD PP_0387 N.D.
RNA polymerase sigma factor for flagellar operon PP_4341 +2.2
RNA polymerase sigma-54 factor RpoN PP_0952 N.D.
  PP_2888 N.D.

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