SEED Subsystem: Proteolysis in bacteria, ATP-dependent in Pseudomonas sp. RS175

Experiments:

Role Gene Name caffeic (C) 2.5 mM  
⨯
ATP-dependent Clp protease ATP-binding subunit ClpA PFR28_02613 -2.3
ATP-dependent Clp protease ATP-binding subunit ClpX PFR28_01229 N.D.
ATP-dependent Clp protease adaptor protein ClpS PFR28_02614 -0.9
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) PFR28_01228 N.D.
  PFR28_02682 -0.2
ATP-dependent Clp protease, ATP-binding subunit ClpC No genes
ATP-dependent hsl protease ATP-binding subunit HslU PFR28_04998 -0.6
ATP-dependent protease HslV (EC 3.4.25.-) PFR28_04999 N.D.
ATP-dependent protease La (EC 3.4.21.53) No genes
ATP-dependent protease La (EC 3.4.21.53) Type I PFR28_00322 +0.1
  PFR28_01230 -1.3
ATP-dependent protease La (EC 3.4.21.53) Type II PFR28_03779 -1.7
ATP-dependent protease domain protein (EC 3.4.21.-) No genes
ATPase, AFG1 family PFR28_03612 -0.8
ClpB protein PFR28_02390 -0.0
  PFR28_03746 -0.3
  PFR28_04464 +0.1
ClpXP protease specificity-enhancing factor No genes
Nucleotide excision repair protein, with UvrB/UvrC motif No genes
Outer membrane stress sensor protease DegQ, serine protease No genes
Outer membrane stress sensor protease DegS PFR28_00191 -0.7

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