SEED Subsystem: Glycine and Serine Utilization in Pseudomonas fluorescens GW456-L13

Experiments:

Role Gene Name L-Serine (N)  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) PfGW456L13_1866 -0.0
  PfGW456L13_902 -0.1
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) PfGW456L13_1617 +0.3
  PfGW456L13_2327 -0.8
  PfGW456L13_2961 +0.1
  PfGW456L13_3497 +0.3
  PfGW456L13_4494 -0.1
  PfGW456L13_943 -0.3
D-serine dehydratase (EC 4.3.1.18) PfGW456L13_3648 -0.2
D-serine dehydratase transcriptional activator PfGW456L13_3623 +0.4
  PfGW456L13_3647 -0.2
D-serine permease DsdX PfGW456L13_3649 -0.0
D-serine/D-alanine/glycine transporter PfGW456L13_4790 +0.4
Glycerate kinase (EC 2.7.1.31) PfGW456L13_1847 -0.6
  PfGW456L13_2941 -2.5
Glycine cleavage system H protein PfGW456L13_1869 +0.4
  PfGW456L13_2686 +0.6
  PfGW456L13_903 +0.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) PfGW456L13_1868 +0.2
  PfGW456L13_904 -0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) PfGW456L13_1089 +0.0
  PfGW456L13_1867 +0.0
  PfGW456L13_4954 -4.7
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) PfGW456L13_2439 -0.0
Phosphoserine aminotransferase (EC 2.6.1.52) PfGW456L13_2175 N.D.
Phosphoserine phosphatase (EC 3.1.3.3) PfGW456L13_172 -0.6
  PfGW456L13_4205 +0.0
  PfGW456L13_951 -4.3
  PfGW456L13_971 +0.0
Serine hydroxymethyltransferase (EC 2.1.2.1) PfGW456L13_1116 +0.1
  PfGW456L13_1451 N.D.
  PfGW456L13_1452 +0.0
  PfGW456L13_2685 -0.0
Serine transporter PfGW456L13_3379 -1.2
Seryl-tRNA synthetase (EC 6.1.1.11) PfGW456L13_2655 N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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