SEED Subsystem: Aromatic amino acid degradation in Pseudomonas simiae WCS417

Experiments:

Role Gene Name L-Valine (C)  
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) No genes
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) PS417_17830 -0.0
  PS417_17835 -0.7
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) PS417_17860 -0.4
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15) PS417_17845 -0.4
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) PS417_14005 -0.3
  PS417_24445 -0.2
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) PS417_17850 N.D.
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) PS417_17840 -0.3
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) PS417_17830 -0.0
  PS417_17835 -0.7
  PS417_17870 N.D.
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase. No genes
Anthranilate dioxygenase large subunit No genes
Anthranilate dioxygenase reductase No genes
Anthranilate dioxygenase small subunit PS417_23690 -2.2
Aromatic amino acid transport protein AroP PS417_22235 +1.0
  PS417_23700 +2.5
Aromatic ring-opening dioxygenase No genes
Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) No genes
Homoprotocatechuate degradative operon repressor No genes
Indoleacetamide hydrolase (EC 3.5.1.-) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) PS417_23710 -0.3
Phenylalanine hydroxylase transcriptional activator PhhR PS417_19895 +0.0
Phenylalanine-4-hydroxylase (EC 1.14.16.1) PS417_19900 +0.1
Phenylalanine-specific permease PS417_23645 -0.3
Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase No genes
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase PS417_07275 -0.0
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase No genes
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein (EC 1.2.1.60) No genes
Putative fumarylacetoacetate (FAA) hydrolase PS417_18185 -0.6
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) PS417_23705 +0.5
Tryptophan 2-monooxygenase (EC 1.13.12.3) No genes
Tryptophanase (EC 4.1.99.1) No genes

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