SEED Subsystem: Acetyl-CoA fermentation to Butyrate in Pseudomonas simiae WCS417

Experiments:

Role Gene Name L-Valine (C)  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) PS417_07575 -0.6
  PS417_21215 -0.2
3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) No genes
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) No genes
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) PS417_07575 -0.6
  PS417_21215 -0.2
Acetoacetate metabolism regulatory protein AtoC No genes
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetyl-CoA acetyltransferase (EC 2.3.1.9) PS417_10515 +0.0
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) No genes
Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (EC 2.8.3.8) No genes
Butyrate kinase (EC 2.7.2.7) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) PS417_09185 -0.2
  PS417_10685 -0.2
  PS417_13840 -3.1
  PS417_13850 -0.4
  PS417_14420 +0.5
  PS417_15190 -0.1
  PS417_16045 +0.2
  PS417_20795 -0.1
  PS417_04135 +0.2
Electron transfer flavoprotein, alpha subunit PS417_21295 N.D.
  PS417_26230 +0.2
Electron transfer flavoprotein, beta subunit PS417_12410 N.D.
  PS417_21300 N.D.
  PS417_26225 +0.3
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) PS417_21305 N.D.
Enoyl-CoA hydratase (EC 4.2.1.17) PS417_07030 -0.3
  PS417_07575 -0.6
  PS417_08535 -0.5
  PS417_10680 -0.6
  PS417_11445 -0.4
  PS417_22625 +0.2
Ferredoxin-like protein No genes
Ferredoxin-like protein FixX No genes
Ferredoxin-like protein YdiT No genes
Ferredoxin-like protein YgcO No genes
Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) No genes
phosphotransbutyrylase (EC 2.3.1.19) No genes

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