SEED Subsystem: TCA Cycle in Pseudomonas putida KT2440

Role	Gene	Name	D-2-Aminobutyric (N)
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	PP_4189		N.D.
Aconitate hydratase (EC 4.2.1.3)	PP_2112		-0.0
Aconitate hydratase 2 (EC 4.2.1.3)	No genes
Aconitate hydratase X, predicted	No genes
Aconitate hydratase large subunit (EC 4.2.1.3)	No genes
Aconitate hydratase small subunit (EC 4.2.1.3)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	No genes
Citrate synthase (si) (EC 2.3.3.1)	PP_4194		N.D.
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	PP_5366		-0.2
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	PP_4188		N.D.
Fumarate hydratase class I (EC 4.2.1.2)	No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	PP_0897		N.D.
Fumarate hydratase class II (EC 4.2.1.2)	PP_0944		+0.0
	PP_1755		-0.1
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	PP_4011		+1.1
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)	No genes
Malate dehydrogenase (EC 1.1.1.37)	PP_0654		-0.1
	PP_2835		+0.4
Malate:quinone oxidoreductase (EC 1.1.5.4)	PP_0751		N.D.
	PP_1251		-1.1
	PP_2925		+0.3
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425	No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	PP_4191		N.D.
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	PP_4190		N.D.
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	PP_4185		N.D.
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	PP_4186		N.D.
Transcriptional regulator of succinyl CoA synthetase operon	No genes
hypothetical protein that often co-occurs with aconitase	No genes