SEED Subsystem: Alkanesulfonate assimilation in Pseudomonas putida KT2440

Experiments:

Role Gene Name Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant  
⨯
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component PP_3211 -0.4
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component No genes
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components PP_3217 -2.2
  PP_3228 +0.2
  PP_3229 +0.1
  PP_3636 -0.2
Alkanesulfonate monooxygenase (EC 1.14.14.5) PP_0238 +0.6
  PP_3219 -0.0
Alkanesulfonates ABC transporter ATP-binding protein PP_0240 +0.3
  PP_2240 +0.4
  PP_3637 -0.4
Alkanesulfonates transport system permease protein PP_0239 +0.2
  PP_3635 -0.8
Alkanesulfonates-binding protein PP_0237 -0.1
  PP_2771 +0.4
  PP_3528 -0.6
Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) PP_0169 +0.1
  PP_0230 N.D.
  PP_4466 -0.2
Arylsulfatase (EC 3.1.6.1) No genes
Dibenzothiophene desulfurization enzyme B No genes
FMN reductase (EC 1.5.1.29) PP_0236 +0.2
  PP_2764 -0.6
Organosulfonate utilization protein SsuF PP_0241 -1.0
Putative alkylsulfatase (EC 1.14.11.17) No genes
Putative arylsulfatase regulatory protein No genes
Sulfate ester binding protein No genes
probable dibenzothiophene desulfurization enzyme No genes
sulfonate monooxygenase No genes

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