SEED Subsystem: tRNA processing in Dickeya dianthicola ME23

Experiments:

Role Gene Name Stem-Norland  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase DZA65_RS07510 -0.0
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) DZA65_RS11600 +1.3
Ribonuclease P protein component (EC 3.1.26.5) DZA65_RS22710 N.D.
Ribonuclease PH (EC 2.7.7.56) DZA65_RS00730 +0.9
Ribonuclease T (EC 3.1.13.-) DZA65_RS13120 +0.1
Ribonuclease Z (EC 3.1.26.11) DZA65_RS00050 -0.1
  DZA65_RS04490 -0.1
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) DZA65_RS18035 +0.4
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) DZA65_RS15370 -1.2
tRNA pseudouridine synthase B (EC 4.2.1.70) DZA65_RS03245 -0.7
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase DZA65_RS06640 +0.1
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) DZA65_RS16840 N.D.
tRNAHis-5'-guanylyltransferase No genes

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