SEED Subsystem: L-Arabinose utilization in Escherichia coli ECOR27

Experiments:

Role Gene Name L-Arabinose  
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) No genes
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase II (EC 3.2.1.55) No genes
Alpha-arabinosides ABC transport system, permease protein 1 No genes
Alpha-arabinosides ABC transport system, permease protein 2 No genes
Alpha-arabinosides ABC transport system, substrate-binding protein No genes
Alternative L-arabinose isomerase (EC 5.3.1.4) No genes
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) No genes
Arabinose operon protein AraL No genes
Arabinose operon regulatory protein NOLOHH_03120 araC -2.4
Arabinose-proton symporter NOLOHH_11165 galP -0.0
  NOLOHH_11815 araE -2.0
Arabinose-regulated TonB-dependent outer membrane receptor No genes
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase No genes
Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster No genes
L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) No genes
L-arabinolactonase (EC 3.1.1.15) No genes
L-arabinose 1-dehydrogenase (EC 1.1.1.46) No genes
L-arabinose isomerase (EC 5.3.1.4) NOLOHH_03130 araB -3.6
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) NOLOHH_16515 araG -0.2
L-arabinose transport system permease protein (TC 3.A.1.2.2) NOLOHH_16520 araH +0.6
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) NOLOHH_16510 araF +0.0
L-arabinose-specific 1-epimerase (mutarotase) No genes
L-arabonate dehydratase (EC 4.2.1.25) No genes
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) NOLOHH_03135 araD -5.1
  NOLOHH_07800 araD -0.0
Possible GPH family transporter (TC 2.A.2) for arabinosides No genes
Predicted L-arabinose ABC transport system, ATP-binding protein No genes
Predicted L-arabinose ABC transport system, periplasmic arabinose-binding protein No genes
Predicted L-arabinose ABC transport system, permease protein 1 No genes
Predicted L-arabinose ABC transport system, permease protein 2 No genes
Predicted L-arabinose isomerase (EC 5.3.1.4) No genes
Predicted arabinose ABC transporter, permease protein 1 No genes
Predicted arabinose ABC transporter, permease protein 2 No genes
Predicted arabinose ABC transporter, substrate binding protein No genes
Predicted glycerol-1-phosphate dehydrogenase, arabinose operon No genes
Protein AraJ precursor NOLOHH_01490 araJ -0.1
Putative oxidoreductase in arabinose utilization cluster No genes
Ribulokinase (EC 2.7.1.16) NOLOHH_03125 araB -2.2
Transcriptional regulator of the arabinose operon in Shewanella, GntR family No genes
Transcriptional repressor of arabinoside utilization operon, GntR family No genes
alternative Ribulokinase (EC 2.7.1.16) No genes

Or select organism:

Or view this subsystem at the SEED (slow)