SEED Subsystem: tRNA processing in Bacteroides stercoris CC31F

Experiments:

Role Gene Name a-Cyclodextrin 2.5 mg/mL (C)  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) HMPREF1181_RS10805 -0.4
Ribonuclease D (EC 3.1.26.3) No genes
Ribonuclease P protein component (EC 3.1.26.5) HMPREF1181_RS01655 N.D.
Ribonuclease PH (EC 2.7.7.56) No genes
Ribonuclease T (EC 3.1.13.-) No genes
Ribonuclease Z (EC 3.1.26.11) HMPREF1181_RS05870 +0.2
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) No genes
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) HMPREF1181_RS06250 -0.5
tRNA pseudouridine synthase B (EC 4.2.1.70) HMPREF1181_RS01710 -1.4
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase HMPREF1181_RS01770 -1.7
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) HMPREF1181_RS09385 -1.7
tRNAHis-5'-guanylyltransferase No genes

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