SEED Subsystem: Alginate metabolism in Pseudomonas simiae WCS417

Experiments:

Role Gene Name L-Glutamine (C)  
⨯
Alginate biosynthesis protein Alg8 PS417_04840 +0.1
Alginate biosynthesis protein AlgX PS417_04815 -0.2
Alginate biosynthesis transcriptional activator PS417_21625 +0.1
Alginate lyase (EC 4.2.2.3) No genes
Alginate lyase precursor (EC 4.2.2.3) PS417_26410 -0.0
  PS417_04810 -0.4
GDP-mannose 6-dehydrogenase (EC 1.1.1.132) PS417_04845 +0.2
Hexuronate transporter PS417_14775 -0.0
  PS417_24450 -0.0
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) PS417_09635 -0.1
  PS417_04790 +0.1
Mannose-6-phosphate isomerase (EC 5.3.1.8) PS417_09220 -0.3
  PS417_02690 +2.1
  PS417_04790 +0.1
Pectin degradation protein KdgF No genes
Phosphomannomutase (EC 5.4.2.8) PS417_27785 +0.3
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-) PS417_04820 +0.1
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) PS417_20605 +0.2
  PS417_04805 -0.0
RNA polymerase sigma-H factor AlgT PS417_07120 +0.1
alginate biosynthesis protein AlgJ PS417_04800 +0.2
alginate o-acetyltransferase AlgF PS417_04795 +0.1
outer membrane protein AlgE PS417_04825 +0.0
poly(beta-D-mannuronate) lyase (EC 4.2.2.3) No genes

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