SEED Subsystem: Polyhydroxybutyrate metabolism in Pseudomonas fluorescens GW456-L13

Experiments:

Role Gene Name L-Phenylalanine (C)  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) PfGW456L13_4041 -1.7
  PfGW456L13_412 -0.1
  PfGW456L13_4146 -0.0
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) PfGW456L13_3873 -0.4
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) PfGW456L13_4041 -1.7
  PfGW456L13_412 -0.1
  PfGW456L13_4146 -0.0
3-ketoacyl-CoA thiolase (EC 2.3.1.16) PfGW456L13_2157 +0.0
  PfGW456L13_2982 -0.3
  PfGW456L13_3408 -0.1
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetoacetyl-CoA synthetase (EC 6.2.1.16) PfGW456L13_2593 -0.1
  PfGW456L13_2872 -2.6
  PfGW456L13_4159 +0.0
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) PfGW456L13_2873 -1.5
D-beta-hydroxybutyrate permease PfGW456L13_2874 -1.2
Enoyl-CoA hydratase (EC 4.2.1.17) PfGW456L13_1812 -0.1
  PfGW456L13_2246 -0.4
  PfGW456L13_2412 -0.1
  PfGW456L13_2533 -0.0
  PfGW456L13_2535 -0.1
  PfGW456L13_3210 -0.1
  PfGW456L13_3388 -0.1
  PfGW456L13_3427 -0.4
  PfGW456L13_3636 +0.3
  PfGW456L13_4041 -1.7
  PfGW456L13_412 -0.1
  PfGW456L13_4531 -0.1
Intracellular PHB depolymerase (EC 3.1.1.-) No genes
Poly(3-hydroxyalkanoate) depolymerase PfGW456L13_293 +0.0
Polyhydroxyalkanoate granule-associated protein PhaF PfGW456L13_296 +0.7
Polyhydroxyalkanoic acid synthase PfGW456L13_292 +0.1
  PfGW456L13_294 -0.1
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter PfGW456L13_1556 -0.0
polyhydroxyalkanoate granule-associated protein PhaI PfGW456L13_297 +0.0
polyhydroxyalkanoate synthesis repressor PhaR No genes

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