SEED Subsystem: Inositol catabolism in Agrobacterium fabrum C58

Experiments:

Role Gene Name Cellohexaose (C)  
⨯
5-deoxy-glucuronate isomerase (EC 5.3.1.-) Atu4509 -0.0
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) No genes
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29) No genes
5-keto-2-deoxygluconokinase (EC 2.7.1.92) Atu4512 +0.0
Epi-inositol hydrolase (EC 3.7.1.-) Atu4511 -0.1
Fe-containing alcohol dehydrogenase No genes
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1) Atu4553 +0.1
  Atu5436 -0.2
Inositol oxygenase (EC 1.13.99.1) No genes
Inositol transport system ATP-binding protein Atu3371 +0.3
Inositol transport system permease protein Atu3150 +0.3
  Atu4557 +0.2
Inositol transport system sugar-binding protein Atu2505 -0.1
  Atu2601 +0.1
  Atu3174 -0.0
  Atu4551 -0.0
  Atu4552 +0.0
Inosose dehydratase (EC 4.2.1.44) Atu4510 +0.1
  Atu5434 +0.0
Inosose isomerase (EC 5.3.99.-) Atu3235 +0.2
  Atu4362 -0.1
  Atu4374 -1.3
  Atu4555 +0.1
Major myo-inositol transporter IolT No genes
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) No genes
Minor myo-inositol transporter IolF No genes
Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Atu3966 -0.0
  Atu4012 -0.1
  Atu4508 +0.0
  Atu5435 +0.0
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) Atu4554 -0.1
Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) No genes
Predicted transcriptional regulator of the myo-inositol catabolic operon Atu4514 -0.1
Sodium/myo-inositol cotransporter No genes
Transcriptional repressor of the myo-inositol catabolic operon DeoR family No genes
uncharacterized domain Atu4512 +0.0

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