SEED Subsystem: Entner-Doudoroff Pathway in Agrobacterium fabrum C58

Experiments:

Role Gene Name D-Glucuronic gamma lactone (C)  
⨯
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) Atu3469 -4.9
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type (EC 5.4.2.1) No genes
2-dehydro-3-deoxygluconate aldolase (EC 4.1.2-) No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Atu2296 -0.3
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) No genes
6-phosphogluconolactonase (EC 3.1.1.31) No genes
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Atu0599 N.D.
Aldehyde dehydrogenase (EC 1.2.1.3) Atu2139 +0.2
  Atu2224 -0.1
  Atu3401 +0.2
  Atu3403 -0.2
  Atu3950 +0.2
  Atu3959 -0.2
  Atu4241 -0.1
  Atu4849 -0.1
  Atu5228 N.D.
D-glycerate 2-kinase (EC 2.7.1.-) Atu3232 +0.0
  Atu5334 N.D.
Enolase (EC 4.2.1.11) Atu1426 N.D.
Glucokinase (EC 2.7.1.2) Atu0184 +0.7
Gluconate dehydratase (EC 4.2.1.39) Atu0270 -0.0
  Atu1406 -0.1
  Atu4196 +0.3
  Atu5458 -0.1
Gluconokinase (EC 2.7.1.12) Atu0195 -0.2
  Atu3964 -4.1
Gluconolactonase (EC 3.1.1.17) Atu4029 -2.1
Glucose 1-dehydrogenase (EC 1.1.1.47) No genes
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) Atu4135 +0.1
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Atu0600 N.D.
  Atu4835 -0.2
Hexokinase (EC 2.7.1.1) No genes
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Atu3737 N.D.
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD) No genes
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, cyanobacterial No genes
Phosphogluconate dehydratase (EC 4.2.1.12) Atu0598 -0.0
Phosphoglycerate kinase (EC 2.7.2.3) Atu3739 -5.5
Phosphoglycerate mutase (EC 5.4.2.1) Atu3016 +0.9
  Atu3017 +0.5
Polyphosphate glucokinase (EC 2.7.1.63) Atu4836 -0.2
Pyruvate kinase (EC 2.7.1.40) Atu3762 N.D.

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