SEED Subsystem: Denitrification in Magnetospirillum magneticum AMB-1

Experiments:

Role Gene Name 30_an_nonmag_2  
⨯
Copper-containing nitrite reductase (EC 1.7.2.1) No genes
Cytochrome cd1 nitrite reductase (EC:1.7.2.1) AMB_RS07060 -0.8
  AMB_RS21080 +0.0
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) No genes
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) AMB_RS06200 -1.0
  AMB_RS18910 -0.4
Nitric oxide reductase activation protein NorD AMB_RS14810 -1.7
Nitric oxide reductase activation protein NorE AMB_RS14805 +0.0
Nitric oxide reductase activation protein NorQ AMB_RS14815 -1.5
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent No genes
Nitric-oxide reductase subunit B (EC 1.7.99.7) AMB_RS14820 -0.7
Nitric-oxide reductase subunit C (EC 1.7.99.7) AMB_RS14825 -0.7
Nitrite reductase accessory protein NirV AMB_RS08690 +0.1
  AMB_RS12910 -0.3
  AMB_RS24310 -0.3
  AMB_RS24320 +0.1
Nitrous oxide reductase maturation periplasmic protein NosX AMB_RS13140 -1.1
Nitrous oxide reductase maturation protein NosD AMB_RS15515 -1.0
Nitrous oxide reductase maturation protein NosF (ATPase) AMB_RS15500 -0.3
Nitrous oxide reductase maturation protein NosR No genes
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL AMB_RS14640 -0.2
  AMB_RS15495 -0.4
Nitrous oxide reductase maturation transmembrane protein NosY AMB_RS15490 -1.4
Nitrous-oxide reductase (EC 1.7.99.6) AMB_RS15535 -1.2
NnrS protein involved in response to NO AMB_RS11790 -0.0
  AMB_RS17730 +0.1
NnrT family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) AMB_RS22125 -1.4

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